Applied Mathematics - GIDP – Scholarly Works

2024

Inertia, gravity and the meaning of mass

Melia, F., Jan 1 2024, In: Physica Scripta. 99, 1, ad16c7.

Research output: Contribution to journal › Article › peer-review

Open Access

Osmotic stress studies of G-protein-coupled receptor rhodopsin activation

Struts, A. V., Barmasov, A. V., Fried, S. D. E., Hewage, K. S. K., Perera, S. M. D. C. & Brown, M. F., Jan 2024, In: Biophysical Chemistry. 304, 107112.

Research output: Contribution to journal › Article › peer-review

Pseudo-Spin Polarized One-Way Elastic Wave Eigenstates in One-Dimensional Phononic Superlattices

Deymier, P. A., Runge, K. A., Khanikaev, A. & Alù, A., Jan 2024, In: Crystals. 14, 1, 92.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Self-channeling of a multi-Joule 10 µm picosecond pulse train through long distances in air

Tochitsky, S. Y. A., Welch, E. C., Matteo, D. A., Panagiotopoulos, P., Kolesik, M., Moloney, J. V. & Joshi, C., Jan 15 2024, In: Optics Express. 32, 2, p. 2067-2080 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Tensor Renormalization Group at Low Temperatures: Discontinuity Fixed Point

Kennedy, T. & Rychkov, S., Jan 2024, In: Annales Henri Poincare. 25, 1, p. 773-841 69 p.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

2023

Accounting for extra-binomial variability with differentially expressed genetic pathway data: A collaborative bioinformatic study

Aberasturi, D. T., Piegorsch, W. W., Bedrick, E. J. & Lussier, Y. A., Dec 2023, In: Stat. 12, 1, e518.

Research output: Contribution to journal › Article › peer-review

Acoustoelectric Time-Reversal for Ultrasound Phase-Aberration Correction

Preston, C., Alvarez, A. M., Allard, M., Barragan, A. & Witte, R. S., Aug 1 2023, In: IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control. 70, 8, p. 854-864 11 p.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

A fast computational model for circulatory dynamics: effects of left ventricle–aorta coupling

Moulton, M. J. & Secomb, T. W., Jun 2023, In: Biomechanics and Modeling in Mechanobiology. 22, 3, p. 947-959 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

A first-principles and CALPHAD-assisted phase-field model for microstructure evolution: Application to Mo-V binary alloy systems

Kumar Thakur, A., Kovacevic, S., Manga, V. R., Deymier, P. A. & Muralidharan, K., Nov 2023, In: Materials and Design. 235, 112443.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

A hybrid robust-stochastic optimization approach for day-ahead scheduling of cascaded hydroelectric system in restructured electricity market

Zhong, Z., Fan, N. & Wu, L., Apr 16 2023, In: European Journal of Operational Research. 306, 2, p. 909-926 18 p.

Research output: Contribution to journal › Article › peer-review

Open Access

8 Scopus citations

A Measurement of the Kuiper Belt’s Mean Plane From Objects Classified By Machine Learning

Matheson, I. & Malhotra, R., Jun 1 2023, In: Astronomical Journal. 165, 6, 241.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

A Multi-Fidelity Approach for Reliability Assessment Based on the Probability of Classification Inconsistency

Pidaparthi, B. & Missoum, S., Feb 2023, In: Journal of Computing and Information Science in Engineering. 23, 1, 011008.

Research output: Contribution to journal › Article › peer-review

8 Scopus citations

An autonomous mathematical model for the mammalian cell cycle

Williams, K. S., Secomb, T. W. & El-Kareh, A. W., Jul 21 2023, In: Journal of Theoretical Biology. 569, 111533.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

A resolution of the monopole problem in the R_h = ct Universe

Melia, F., Dec 2023, In: Physics of the Dark Universe. 42, 101329.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

A von Mises-Fisher distribution for the orbital poles of the plutinos

Matheson, I. C., Malhotra, R. & Keane, J. T., Jul 1 2023, In: Monthly Notices of the Royal Astronomical Society. 522, 3, p. 3298-3307 10 p.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Bend or Twist What Plectonemes Reveal about the Mysterious Motility of Spiroplasma

Ryan, P. M., Shaevitz, J. W. & Wolgemuth, C. W., Oct 27 2023, In: Physical review letters. 131, 17, 178401.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Binary Formation in a 100 μm Dark Massive Core

Kong, S., Arce, H. G., Tobin, J. J., Zhang, Y., Maureira, M. J., Kratter, K. M. & Pillai, T. G. S., Jun 1 2023, In: Astrophysical Journal. 950, 2, 187.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

Biophysical phenotype mixtures reveal advantages for tumor muscle invasion in vivo

Marr, K. D., Gard, J. M. C., Harryman, W. L., Keeswood, E. J., Paxson, A. I., Wolgemuth, C. W., Knudsen, B. S., Nagle, R. B., Hazlehurst, L., Sorbellini, M. & Cress, A. E., Nov 7 2023, In: Biophysical Journal. 122, 21, p. 4194-4206 13 p.

Research output: Contribution to journal › Article › peer-review

Biorthogonal decomposition of the disturbance flow field generated by particle impingement on a hypersonic boundary layer

A. Al Hasnine, S. M., Russo, V., Tumin, A. & Brehm, C., Aug 10 2023, In: Journal of Fluid Mechanics. 969, A1.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Broadband 1.5 GHz VECSEL-Based Laser System for High Speed Multicontrast Nonlinear Imaging

Bondaz, T. A. G., McInerney, J. G., Moloney, J. V. & Jason Jones, R., Jun 1 2023, In: IEEE Photonics Technology Letters. 35, 11, p. 589-592 4 p.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Classical Molecular Dynamics Simulation of Glyonic Liquids: Structural Insights and Relation to Conductive Properties

Hei, B., Pemberton, J. E. & Schwartz, S. D., Feb 2 2023, In: Journal of Physical Chemistry B. 127, 4, p. 921-931 11 p.

Research output: Contribution to journal › Article › peer-review

Clinical severity is correlated with age at seizure onset and biophysical properties of recurrent gain of function variants associated with SCN8A-related epilepsy

Chung, K. M., Hack, J., Andrews, J., Galindo-Kelly, M., Schreiber, J., Watkins, J. & Hammer, M. F., Dec 2023, In: Epilepsia. 64, 12, p. 3365-3376 12 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Conditions for Kir-induced bistability of membrane potential in capillary endothelial cells

Delmoe, M. & Secomb, T. W., Jan 2023, In: Mathematical Biosciences. 355, 108955.

Research output: Contribution to journal › Article › peer-review

Open Access

Connecting Conformational Motions to Rapid Dynamics in Human Purine Nucleoside Phosphorylase

Frost, C. F., Balasubramani, S. G., Antoniou, D. & Schwartz, S. D., Jan 12 2023, In: Journal of Physical Chemistry B. 127, 1, p. 144-150 7 p.

Research output: Contribution to journal › Article › peer-review

8 Scopus citations

Continuum dynamics of suspensions at low Reynolds number

Wolgemuth, C. W. & Palos-Chavez, J. I., Jun 29 2023, In: Journal of Fluid Mechanics. 966, A16.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

Conversations with Flaschka: Kac–Moody groups and Verblunsky coefficients

Latifi, M. J. & Pickrell, D., Mar 2023, In: Physica D: Nonlinear Phenomena. 445, 133645.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Cortical microvascular blood flow velocity mapping by combining dynamic light scattering optical coherence tomography and two-photon microscopy

Pian, Q., Alfadhel, M., Tang, J., Lee, G. V., Li, B., Fu, B., Ayata, Y., Yaseen, M. A., Boas, D. A., Secomb, T. W. & Sakadzic, S., Jul 1 2023, In: Journal of biomedical optics. 28, 7, 076003.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

Coulomb enhancement of high harmonic generation in monolayer transition metal dichalcogenides

Hader, J., Neuhaus, J., Moloney, J. V. & Koch, S. W., Apr 15 2023, In: Optics letters. 48, 8, p. 2094-2097 4 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Current Source Density Imaging Using Regularized Inversion of Acoustoelectric Signals

Kang, J., Huang, C., Perkins, C., Alvarez, A., Kunyansky, L., Witte, R. S. & O'Donnell, M., Mar 1 2023, In: IEEE Transactions on Medical Imaging. 42, 3, p. 739-749 11 p.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Data-driven learning of differential equations: combining data and model uncertainty

Glasner, K., Feb 2023, In: Computational and Applied Mathematics. 42, 1, 36.

Research output: Contribution to journal › Article › peer-review

Demand-Driven Harvest Planning and Machinery Scheduling for Guayule

Yao, S., Fan, N., Seavert, C. & Teegerstrom, T., Mar 2023, In: Operations Research Forum. 4, 1, 9.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Demographic history inference and the polyploid continuum

Blischak, P. D., Sajan, M., Barker, M. S. & Gutenkunst, R. N., Aug 2023, In: Genetics. 224, 4, iyad107.

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

Direct images and spectroscopy of a giant protoplanet driving spiral arms in MWC 758

Wagner, K., Stone, J., Skemer, A., Ertel, S., Dong, R., Apai, D., Spalding, E., Leisenring, J., Sitko, M., Kratter, K., Barman, T., Marley, M., Miles, B., Boccaletti, A., Assani, K., Bayyari, A., Uyama, T., Woodward, C. E., Hinz, P. & Briesemeister, Z. & 6 others, Lawson, K., Ménard, F., Pantin, E., Russell, R. W., Skrutskie, M. & Wisniewski, J., Oct 2023, In: Nature Astronomy. 7, 10, p. 1208-1217 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

17 Scopus citations

Effect of stress on the dissolution/crystallization of apatite in aqueous solution: A thermochemical equilibrium study

Deymier, A. C., Deymier, P. A., Latypov, M. & Muralidharan, K., Jul 10 2023, In: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 381, 2250, 20220242.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Effects of sleep on breakfast behaviors in recently unemployed adults

Callovini, L. C., Rojo-Wissar, D. M., Mayer, C., Glickenstein, D. A., Karamchandani, A. J., Lin, K. K., Thomson, C. A., Quan, S. F., Silva, G. E. & Haynes, P. L., 2023, (Accepted/In press) In: Sleep Health.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Estimation of shear stress heterogeneity along capillary segments in angiogenic rat mesenteric microvascular networks

Hu, N. W., Lomel, B. M., Rice, E. W., Hossain, M. M. N., Sarntinoranont, M., Secomb, T. W., Murfee, W. L. & Balogh, P., Nov 2023, In: Microcirculation. 30, 8, e12830.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

EVL and MIM/MTSS1 regulate actin cytoskeletal remodeling to promote dendritic filopodia in neurons

Parker, S. S., Ly, K. T., Grant, A. D., Sweetland, J., Wang, A. M., Parker, J. D., Roman, M. R., Saboda, K., Roe, D. J., Padi, M., Wolgemuth, C. W., Langlais, P. & Mouneimne, G., May 1 2023, In: The Journal of cell biology. 222, 5

Research output: Contribution to journal › Article › peer-review

Open Access

6 Scopus citations

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

Lauterbur, M. E., Cavassim, M. I. A., Gladstein, A. L., Gower, G., Pope, N. S., Tsambos, G., Adrion, J., Belsare, S., Biddanda, A., Caudill, V., Cury, J., Echevarria, I., Haller, B. C., Hasan, A. R., Huang, X., Iasi, L. N. M., Noskova, E., Obsteter, J., Pavinato, V. A. C. & Pearson, A. & 22 others, Peede, D., Perez, M. F., Rodrigues, M. F., Smith, C. C. R., Spence, J. P., Teterina, A., Tittes, S., Unneberg, P., Vazquez, J. M., Waples, R. K., Wohns, A. W., Wong, Y., Baumdicker, F., Cartwright, R. A., Gorjanc, G., Gutenkunst, R. N., Kelleher, J., Kern, A. D., Ragsdale, A. P., Ralph, P. L., Schrider, D. R. & Gronau, I., Jun 2023, In: eLife. 12, RP84874.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

Framework for the full N-body problem in SE(3) and its reduction to the circular restricted full three-body problem

Nazari, M., Canales, D., McCann, B., Butcher, E. & Howell, K., Aug 2023, In: CELESTIAL MECHANICS AND DYNAMICAL ASTRONOMY. 135, 4, 41.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Gain recovery dynamics in active type-II semiconductor heterostructures

Schäfer, F., Stein, M., Lorenz, J., Dobener, F., Ngo, C., Steiner, J. T., Fuchs, C., Stolz, W., Volz, K., Meier, T., Hader, J., Moloney, J. V., Koch, S. W. & Chatterjee, S., Feb 20 2023, In: Applied Physics Letters. 122, 8, 082104.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Ginzburg-Landau equations on non-compact Riemann surfaces

Ercolani, N. M., Sigal, I. M. & Zhang, J., Oct 15 2023, In: Journal of Functional Analysis. 285, 8, 110074.

Research output: Contribution to journal › Article › peer-review

Open Access

Greater female than male resilience to mortality and morbidity in the Scn8a mouse model of pediatric epilepsy

Bahramnejad, E., Barney, E. R., Lester, S., Hurtado, A., Thompson, T. T., Watkins, J. C. & Hammer, M. F., 2023, (Accepted/In press) In: International Journal of Neuroscience.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Gumbel Laws in the Symmetric Exclusion Process

Conroy, M. & Sethuraman, S., Aug 2023, In: Communications in Mathematical Physics. 402, 1, p. 723-764 42 p.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Heavy water coupling gel for short-wave infrared photoacoustic imaging

Salinas, C. M., Reichel, E., Gupta, A. & Witte, R. S., Nov 1 2023, In: Journal of biomedical optics. 28, 11, 116001.

Research output: Contribution to journal › Article › peer-review

Open Access

Heterogeneous Domain Adaptation With Adversarial Neural Representation Learning: Experiments on E-Commerce and Cybersecurity

Ebrahimi, M., Chai, Y., Zhang, H. H. & Chen, H., Feb 1 2023, In: IEEE Transactions on Pattern Analysis and Machine Intelligence. 45, 2, p. 1862-1875 14 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Higher order long-wave infrared Bessel beams generating tubular plasma waveguides in the atmosphere

Panagiotopoulos, P., Heinz, J., Kolesik, M. & Moloney, J. V., Feb 15 2023, In: OSA Continuum. 2, 2, p. 449-455 7 p.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

High-harmonic generation from a subwavelength dielectric resonator

Zalogina, A., Carletti, L., Rudenko, A., Moloney, J. V., Tripathi, A., Lee, H. C., Shadrivov, I., Park, H. G., Kivshar, Y. & Kruk, S. S., Apr 2023, In: Science Advances. 9, 17, eadg2655.

Research output: Contribution to journal › Article › peer-review

Open Access