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Collaborations and top research areas from the last five years
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CORE--COMPUTING AND ELECTRONIC COMMUNICATIONS
Watts, G. S. (PI) & Warfel, N. A. (PI)
Project: Research project
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Southwest Environmental Health Sciences Center
Lantz, R. C. (PI), Billheimer, D. D. (CoPI), Mash, E. A. (CoPI), Mayersohn, M. (CoPI), Tsaprailis, G. (CoPI), Lantz, R. C. (CoPI), Watts, G. S. (CoPI), Lau, S. (CoPI), Cherrington, N. J. (PI), Mayersohn, M. (CoPI), Wright, S. H. (CoPI), Martinez, F. (CoPI) & Vercelli, D. (CoPI)
Project: Research project
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Liquid biopsy, using a novel DNA methylation signature, distinguishes pancreatic adenocarcinoma from benign pancreatic disease
Vrba, L., Futscher, B. W., Oshiro, M., Watts, G. S., Menashi, E., Hu, C., Hammad, H., Pennington, D. R., Golconda, U., Gavini, H., Roe, D. J., Shroff, R. T. & Nelson, M. A., Dec 2022, In: Clinical Epigenetics. 14, 1, 28.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
An adaptable and non-invasive method for tracking Bifidobacterium animalis subspecies lactis 420 in the mouse gut
Lopez-Pier, M. A., Koppinger, M. P., Harris, P. R., Cannon, D. K., Skaria, R. S., Hurwitz, B. L., Watts, G., Aras, S., Slepian, M. J. & Konhilas, J. P., Oct 2021, In: Journal of Microbiological Methods. 189, 106302.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Metagenomic Next-Generation Sequencing in Clinical Microbiology
Watts, G. S. & Hurwitz, B. L., Apr 1 2020, In: Clinical Microbiology Newsletter. 42, 7, p. 53-59 7 p.Research output: Contribution to journal › Article › peer-review
11 Scopus citations -
Identification and quantitation of clinically relevant microbes in patient samples: Comparison of three k-mer based classifiers for speed, accuracy, and sensitivity
Watts, G. S., Thornton, J. E., Youens-Clark, K., Ponsero, A. J., Slepian, M. J., Menashi, E., Hu, C., Deng, W., Armstrong, D. G., Reed, S., Cranmer, L. D. & Hurwitz, B. L., 2019, In: PLoS computational biology. 15, 11, e1006863.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria
Watts, G. S., Youens-Clark, K., Slepian, M. J., Wolk, D. M., Oshiro, M. M., Metzger, G. S., Dhingra, D., Cranmer, L. D. & Hurwitz, B. L., Dec 2017, In: Journal of Applied Microbiology. 123, 6, p. 1584-1596 13 p.Research output: Contribution to journal › Article › peer-review
Open Access46 Scopus citations
Datasets
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Liquid biopsy, using a novel DNA methylation signature, distinguishes pancreatic adenocarcinoma from benign pancreatic disease
Vrba, L. (Creator), Futscher, B. W. (Creator), Oshiro, M. (Creator), Watts, G. S. (Creator), Menashi, E. (Creator), Hu, C. (Creator), Hammad, H. (Creator), Pennington, D. R. (Creator), Golconda, U. (Creator), Gavini, H. (Creator), Roe, D. J. (Creator), Shroff, R. T. (Creator) & Nelson, M. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.c.5855943.v1, https://springernature.figshare.com/collections/Liquid_biopsy_using_a_novel_DNA_methylation_signature_distinguishes_pancreatic_adenocarcinoma_from_benign_pancreatic_disease/5855943/1
Dataset
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Immortalization of normal human mammary epithelial cells in two steps by direct targeting of senescence barriers does not require gross genomic alterations
Garbe, J. C. (Creator), Vrba, L. (Creator), Sputova, K. (Creator), Fuchs, L. (Creator), Novak, P. (Creator), Brothman, A. R. (Creator), Jackson, M. (Creator), Chin, K. (Contributor), La Barge, M. A. (Contributor), Watts, G. (Creator), Futscher, B. W. (Creator) & Stampfer, M. R. (Creator), figshare, 2015
DOI: 10.6084/m9.figshare.1241556.v2, https://figshare.com/articles/Immortalization_of_normal_human_mammary_epithelial_cells_in_two_steps_by_direct_targeting_of_senescence_barriers_does_not_require_gross_genomic_alterations/1241556/2
Dataset
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Immortalization of normal human mammary epithelial cells in two steps by direct targeting of senescence barriers does not require gross genomic alterations
Garbe, J. C. (Creator), Vrba, L. (Creator), Sputova, K. (Creator), Fuchs, L. (Creator), Novak, P. (Creator), Brothman, A. R. (Creator), Jackson, M. (Creator), Chin, K. (Contributor), La Barge, M. A. (Contributor), Watts, G. (Creator), Futscher, B. W. (Creator) & Stampfer, M. R. (Creator), figshare, 2014
DOI: 10.6084/m9.figshare.1241556.v1, https://figshare.com/articles/Immortalization_of_normal_human_mammary_epithelial_cells_in_two_steps_by_direct_targeting_of_senescence_barriers_does_not_require_gross_genomic_alterations/1241556/1
Dataset