Scholarly Works per year
Scholarly Works per year
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Dive into the research topics where Greg Caporaso is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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Author Correction: A roadmap for equitable reuse of public microbiome data(Nature Microbiology, 10.1038/s41564-025-02116-2)
The Data Reuse Consortium, Jan 2026, In: Nature Microbiology. 11, 1, p. 335 1 p.Research output: Contribution to journal › Comment/debate › peer-review
Open Access -
Exploring life’s hidden majority: microbial dark matter symposium highlights
Mulay, S. A., Leshyk, V., Caporaso, J. G., Eisen, J. A., Kelly, L., Lloyd, K. G., Osburn, M. R., Podar, M., Roux, S., Regberg, S. A. B., Ruff, S. E., Tierney, B., Tighe, S., Trembath-Reichert, E., Venkateswaran, K., Woyke, T., Locken, K. M., Sapers, H. M. & Whiteson, K., Jan 2026, In: mSphere. 11, 7, p. 1-12 12 p.Research output: Contribution to journal › Article › peer-review
Open Access -
First results of a dose-escalation study evaluating Clostridium butyricum MIYAIRI 588 (CBM588) with nivolumab/ipilimumab (nivo/ipi) in metastatic renal cell carcinoma (mRCC).
Zugman, M., Ebrahimi, H., Barragan-Carrillo, R., Dizman, N., Jaime-Casas, S., Li, X., Hsu, J., Castro, D. V., Egelston, C. A., Lee, P. P., Guzman, M., Synold, T. W., Takahashi, M., Hayashi, A., Parks, T. P., Caporaso, G., Lee, K., Dorff, T. B., Pal, S. K. & Chehrazi-Raffle, A., Mar 2026, In: Journal of Clinical Oncology. 44, p. 503 1 p.Research output: Contribution to journal › Conference article › peer-review
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Identify contaminants with decontam on the QIIME 2 Framework
Rabasco, J. T., Bolyen, E., Caporaso, J. G., Sapers, H. & Callahan, B. J., Jun 2026, In: Microbiology Resource Announcements. 15, 6, e01261-25.Research output: Contribution to journal › Article › peer-review
Open Access -
Scikit-bio: a fundamental Python library for biological omic data analysis
Aton, M., McDonald, D., Cañardo Alastuey, J., Azom, R., Batra, P., Bezshapkin, V., Bolyen, E., Cagle, A., Caporaso, J. G., Debelius, J. W., Gorlick, K., Hamsanipally, N., Hunger, L., Keluskar, A., Liao, D., Lu, Y. Y., Navas-Molina, J. A., Pitman, A., Rideout, J. R. & Sazonov, A. & 12 others, , Feb 2026, In: Nature Methods. 23, 2, p. 274-276 3 p.Research output: Contribution to journal › Letter › peer-review
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Datasets
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Additional file 1 of Oligofructose improves small intestinal lipid-sensing mechanisms via alterations to the small intestinal microbiota
Lane, A. I. (Creator), Lindsey, J. (Creator), Cope, E. K. (Creator), Kangath, A. (Creator), Hasneen, T. (Creator), Martinez, T. M. (Creator), Meyer, R. K. (Creator), Cai, H. (Creator), Caporaso, J. G. (Creator), Duca, F. A. (Creator), Vedantam, G. (Creator), Herman, C. (Creator), Weninger, S. N. (Creator) & Jaramillo, S. A. (Creator), figshare, 2024
DOI: 10.6084/m9.figshare.26608063.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Oligofructose_improves_small_intestinal_lipid-sensing_mechanisms_via_alterations_to_the_small_intestinal_microbiota/26608063/1
Dataset
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Oligofructose improves small intestinal lipid-sensing mechanisms via alterations to the small intestinal microbiota
Cope, E. K. (Creator), Hasneen, T. (Creator), Weninger, S. N. (Creator), Duca, F. A. (Creator), Caporaso, J. G. (Creator), Vedantam, G. (Creator), Jaramillo, S. A. (Creator), Lane, A. I. (Creator), Cai, H. (Creator), Meyer, R. K. (Creator), Herman, C. (Creator), Kangath, A. (Creator), Lindsey, J. (Creator) & Martinez, T. M. (Creator), figshare, 2024
DOI: 10.6084/m9.figshare.c.6772774.v1, https://springernature.figshare.com/collections/Oligofructose_improves_small_intestinal_lipid-sensing_mechanisms_via_alterations_to_the_small_intestinal_microbiota/6772774/1
Dataset
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Additional file 2: Dataset S1. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
Kang, D.-W. (Contributor), Adams, J. B. (Creator), Gregory, A. C. (Creator), Borody, T. (Creator), Chittick, L. (Creator), Fasano, A. (Creator), Khoruts, A. (Creator), Geis, E. (Creator), Maldonado, J. (Creator), McDonough-Means, S. (Creator), Pollard, E. L. (Creator), Roux, S. (Creator), Sadowsky, M. J. (Creator), Lipson, K. S. (Creator), Sullivan, M. B. (Creator), Caporaso, J. G. (Contributor) & Krajmalnik-Brown, R. (Creator), figshare, 2017
DOI: 10.6084/m9.figshare.c.3674866_d2.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_Dataset_S1_of_Microbiota_Transfer_Therapy_alters_gut_ecosystem_and_improves_gastrointestinal_and_autism_symptoms_an_open-label_study/4588087/1
Dataset
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Oligofructose improves small intestinal lipid-sensing mechanisms via alterations to the small intestinal microbiota
Martinez, T. M. (Creator), Meyer, R. K. (Creator), Vedantam, G. (Creator), Cai, H. (Creator), Lane, A. I. (Creator), Lindsey, J. (Creator), Jaramillo, S. A. (Creator), Hasneen, T. (Creator), Kangath, A. (Creator), Caporaso, J. G. (Creator), Herman, C. (Creator), Duca, F. A. (Creator), Cope, E. K. (Creator) & Weninger, S. N. (Creator), figshare, 2024
DOI: 10.6084/m9.figshare.c.6772774, https://springernature.figshare.com/collections/Oligofructose_improves_small_intestinal_lipid-sensing_mechanisms_via_alterations_to_the_small_intestinal_microbiota/6772774
Dataset
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Additional file 5: Dataset S2. of Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study
Kang, D.-W. (Contributor), Adams, J. B. (Creator), Gregory, A. C. (Creator), Borody, T. (Creator), Chittick, L. (Creator), Fasano, A. (Creator), Khoruts, A. (Creator), Geis, E. (Creator), Maldonado, J. (Creator), McDonough-Means, S. (Creator), Pollard, E. L. (Creator), Roux, S. (Creator), Sadowsky, M. J. (Creator), Lipson, K. S. (Creator), Sullivan, M. B. (Creator), Caporaso, J. G. (Contributor) & Krajmalnik-Brown, R. (Creator), figshare, 2017
DOI: 10.6084/m9.figshare.c.3674866_d1, https://springernature.figshare.com/articles/dataset/Additional_file_5_Dataset_S2_of_Microbiota_Transfer_Therapy_alters_gut_ecosystem_and_improves_gastrointestinal_and_autism_symptoms_an_open-label_study/4588072
Dataset