Tyson L Swetnam

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39 Article
5 Review article
4 Conference contribution
1 Chapter
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- 1 Comment/debate

MDRepo-an open data warehouse for community-contributed molecular dynamics simulations of proteins
Roy, A., Ward, E., Choi, I., Cosi, M., Edgin, T., Hughes, T. S., Islam, M. S., Khan, A. M., Kolekar, A., Rayl, M., Robinson, I., Sarando, P., Skidmore, E., Swetnam, T. L., Wall, M., Xu, Z., Yung, M. L., Merchant, N. C. & Wheeler, T. J., Jan 6 2025, In: Nucleic acids research. 53, D1, p. D477-D486
Research output: Contribution to journal › Article › peer-review

Open Access
8 Link opens in a new tab Scopus citations
CyVerse: Cyberinfrastructure for open science
Swetnam, T. L., Antin, P. B., Bartelme, R., Bucksch, A., Camhy, D., Chism, G., Choi, I., Cooksey, A. M., Cosi, M., Cowen, C., Culshaw-Maurer, M., Davey, R., Davey, S., Devisetty, U., Edgin, T., Edmonds, A., Fedorov, D., Frady, J., Fonner, J. & Gillan, J. K. & 29 others, Hossain, I., Joyce, B., Lang, K., Lee, T., Littin, S., McEwen, I., Merchant, N., Micklos, D., Nelson, A., Ramsey, A., Roberts, S., Sarando, P., Skidmore, E., Song, J., Sprinkle, M. M., Srinivasan, S., Stanzione, D., Strootman, J. D., Stryeck, S., Tuteja, R., Vaughn, M., Wali, M., Wall, M., Walls, R., Wang, L., Wickizer, T., Williams, J., Wregglesworth, J. & Lyons, E., Feb 2024, In: PLoS computational biology. 20, 2 February, e1011270.
Research output: Contribution to journal › Article › peer-review

Open Access
24 Link opens in a new tab Scopus citations
Data Science for Biochemists: Integrating and Evaluating the Use of Interactive Digital Python Notebooks in a Large-Enrollment Undergraduate Biochemistry Course
Brunk, R., Shukla, K., Hutson, B. L., Wang, Y., Verber, M., Ford, C., Dennis, W., Mehta, A., Hogan, B. P., Swetnam, T. & Brunk, E., Sep 10 2024, In: Journal of Chemical Education. 101, 9, p. 3643-3655 13 p.
Research output: Contribution to journal › Article › peer-review
1 Link opens in a new tab Scopus citations
Data to science: an open-source online platform for managing, visualizing, and publishing UAS data
Jung, J., Fei, S., Tuinstra, M., Yang, Y., Wang, D., Song, C., Gillan, J., Bhandari, M., Ibrahim, A., Zhao, L., Swetnam, T., Barker, B., Jung, M. & Hancock, B., 2024, Autonomous Air and Ground Sensing Systems for Agricultural Optimization and Phenotyping IX. Thomasson, J. A. & Bauer, C. (eds.). SPIE, 1305303. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 13053).
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
1 Link opens in a new tab Scopus citations
Cloud Computing for Research and Education Gets a Sweet Upgrade with CACAO
Skidmore, E., Cosi, M., Swetnam, T., Merchant, N., Xu, Z., Choi, I., Davey, S., Frady, J., Wall, M. & Yung, M., Jul 23 2023, PEARC 2023 - Computing for the common good: Practice and Experience in Advanced Research Computing. Association for Computing Machinery, Inc, p. 251-254 4 p. (PEARC 2023 - Computing for the common good: Practice and Experience in Advanced Research Computing).
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Open Access
1 Link opens in a new tab Scopus citations

Discriminating disturbance from natural variation with LiDAR in semi-arid forests in the southwestern USA
Swetnam, T. L. (Contributor), Lynch, A. M. (Contributor), Falk, D. A. (Contributor), Yool, S. R. (Contributor) & Guertin, D. P. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3308475.v1, https://figshare.com/collections/Discriminating_disturbance_from_natural_variation_with_LiDAR_in_semi-arid_forests_in_the_southwestern_USA/3308475/1
Dataset
Supplement 1. Data files used in the main text.
Swetnam, T. L. (Contributor), Lynch, A. M. (Contributor), Falk, D. A. (Contributor), Yool, S. R. (Contributor) & Guertin, D. P. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.3563991, https://wiley.figshare.com/articles/dataset/Supplement_1_Data_files_used_in_the_main_text_/3563991
Dataset
Estimating forage utilization with drone-based photogrammetric point clouds
Gillan, J. (Creator) & Swetnam, T. L. (Contributor), CyVerse Data Commons, 2019
DOI: 10.25739/6ayd-6j02, http://datacommons.cyverse.org/browse/iplant/home/shared/commons_repo/curated/Gillan_et_al_RAMA_2019
Dataset
Using knowledge graphs to infer gene expression in plants
Thessen, A. E. (Contributor), Jaiswal, P. (Contributor), Cooper, L. (Contributor), Elser, J. (Contributor), Swetnam, T. L. (Contributor) & Hegde, H. (Contributor), ZENODO, Dec 10 2022
DOI: 10.5281/zenodo.8074966, https://zenodo.org/records/8074966
Dataset
NASA TOPS Open Science 101 Instructor Led Training
Pistone, K. (Contributor), Fouilloux, A. C. (Contributor), Lal, V. (Contributor), Riddell, C. D. (Contributor), Bell, T. (Contributor), Sharan, M. (Contributor), Plomp, E. (Contributor), Fanourakis, S. K. (Contributor), Gonzalez-Quiles, J. (Contributor), Chegini, T. (Contributor), Batalha, N. E. (Contributor), Singer, L. P. (Contributor), Ferdush, J. (Contributor), Whitt, D. B. (Contributor), Osman, A. (Contributor), Murphy, K. J. (Contributor), Sanchez, K. (Contributor), Vaz, A. C. (Contributor), Bhogal, S. K. (Contributor), Alwood, J. S. (Contributor), Dotson, J. L. (Contributor), Alzahawi, S. (Contributor), Pérez, F. (Contributor), Azevedo, F. (Contributor), Wu, Q. (Contributor), Martínez, I. (Contributor), Granados, M. (Contributor), Ee, Y. K. (Contributor), Sardana, D. (Contributor), Yuen, K. (Contributor), Paseka, R. E. (Contributor), Galache, J. L. (Contributor), Swetnam, T. L. (Contributor), David, C. H. (Contributor), McAdam, M. M. (Contributor), Karega, P. (Contributor), Crawford, S. M. (Contributor), McKinnon, A. (Contributor), Brown, S. V. (Contributor), McEniry, S. (Contributor), Dang, C. (Contributor), Ringuette, R. (Contributor), Mahtab, S. S. (Contributor), Klusza, S. (Contributor), Hall, S. M. (Contributor), El-Gebali, S. (Contributor), Lacerda, M. (Contributor), Nosek, B. A. (Contributor), Hsing, P. Y. (Contributor), Bremner, P. A. (Contributor), Jian, L. K. (Contributor), Hall, C. (Contributor), Shanahan, H. P. (Contributor), Joseph, A. T. (Contributor), Mandell, A. M. (Contributor), Barker, M. K. (Contributor), Knosp, B. W. (Contributor), Muna, D. N. (Contributor), Kilpatrick, L. (Contributor), Rao, Y. (Contributor), Burt, J. A. (Contributor), Dunleavy, D. J. (Contributor), Croteau, M. J. (Contributor), Marcum, P. M. (Contributor), Papadopoulou, E. (Contributor), Colliander, J. E. (Contributor), Muhammad, S. (Contributor), Barry, R. K. (Contributor), Bayer, J. M. M. (Contributor), Johnson, C. J. (Contributor), Camacho Toro, R. (Contributor), Conley, C. A. (Contributor), Vigil, G. D. (Contributor), Rodríguez-Álvarez, N. (Contributor), Bugbee, K. M. (Contributor), Campitelli, E. (Contributor), Almarzouq, B. (Contributor), Saderi, D. (Contributor) & Gentemann, C. L. (Contributor), ZENODO, Jul 16 2024
DOI: 10.5281/zenodo.12752290, https://zenodo.org/records/12752290
Dataset

Tyson L Swetnam

Fingerprint

Collaborations and top research areas from the last five years

Dive into details

MDRepo-an open data warehouse for community-contributed molecular dynamics simulations of proteins

CyVerse: Cyberinfrastructure for open science

Data Science for Biochemists: Integrating and Evaluating the Use of Interactive Digital Python Notebooks in a Large-Enrollment Undergraduate Biochemistry Course

Data to science: an open-source online platform for managing, visualizing, and publishing UAS data

Cloud Computing for Research and Education Gets a Sweet Upgrade with CACAO

Discriminating disturbance from natural variation with LiDAR in semi-arid forests in the southwestern USA

Supplement 1. Data files used in the main text.

Estimating forage utilization with drone-based photogrammetric point clouds

Using knowledge graphs to infer gene expression in plants

NASA TOPS Open Science 101 Instructor Led Training

Tyson L Swetnam

Fingerprint

Collaborations and top research areas from the last five years

Scholarly Works

Datasets