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Collaborations and top research areas from the last five years
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Exploring the impact of oral health and vaccination on pneumonia-causing bacteria: insights from predictive modeling
Whealy, R. N., Timm, S., Furstenau, T. N., Roberts, A., Maltinsky, S., Wells, S., Drake, K., Ramirez, K., Bolduc, C., Ross, A., Pearson, T. & Fofanov, V. Y., Dec 2026, In: BMC research notes. 19, 1, 67.Research output: Contribution to journal › Article › peer-review
Open Access -
Strain-level genomic variation of Streptococcus mutans and early childhood caries in preschool children from Northern Arizona and Hawai‘i
Whealy, R. N., Furstenau, T. N., Roberts, A., Cocking, J. H., Erickson, D., Brock, B., McCormick, R., Timm, S., Pacheco, M., Mochida-Meek, S. & Fofanov, V., Feb 2026, In: PeerJ. e20808.Research output: Contribution to journal › Article › peer-review
Open Access -
High-throughput targeted amplicon screening tool for characterizing intrahost diversity in Staphylococcus aureus directly from sample
Furstenau, T. N., Whealy, R., Timm, S., Roberts, A., Maltinsky, S., Wells, S. J., Drake, K., Ross, A., Bolduc, C., Pearson, T. & Fofanov, V. Y., Jun 1 2025, In: Microbial Genomics. 11, 6, 001427.Research output: Contribution to journal › Article › peer-review
Open Access -
Host population dynamics influence Leptospira spp. transmission patterns among Rattus norvegicus in Boston, Massachusetts, US
Stone, N. E., Hamond, C., Clegg, J. R., McDonough, R. F., Bourgeois, R. M., Ballard, R., Thornton, N. B., Nuttall, M., Hertzel, H., Anderson, T., Whealy, R. N., Timm, S., Roberts, A. K., Barragán, V., Phipatanakul, W., Leibler, J. H., Benson, H., Specht, A., White, R. & Lecount, K. & 12 others, , Apr 2025, In: PLoS neglected tropical diseases. 2025-April, e0012966.Research output: Contribution to journal › Article › peer-review
Open Access3 Link opens in a new tab Scopus citations -
Longitudinal prevalence and co-carriage of pathogens associated with nursing home acquired pneumonia in three long-term care facilities
Whealy, R. N., Roberts, A., Furstenau, T. N., Timm, S., Maltinsky, S., Wells, S. J., Drake, K., Ramirez, K., Bolduc, C., Ross, A., Pearson, T. & Fofanov, V. Y., Aug 2025, In: PLOS Global Public Health. 5, 8, e0004954.Research output: Contribution to journal › Article › peer-review
Open Access1 Link opens in a new tab Scopus citations
Datasets
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Multi-faceted metagenomic analysis of spacecraft associated surfaces reveal planetary protection relevant microbial composition
Highlander, S. K. (Contributor), Wood, J. M. (Contributor), Gillece, J. D. (Contributor), Fofanov, V. Y. (Contributor), Furstenau, T. N. (Contributor), Singh, N. K. (Contributor), Guan, L. (Contributor), Benardini, J. N. (Contributor), Engelthaler, D. M. (Contributor), Venkateswaran, K. (Contributor) & Keim, P. S. (Contributor), Zenodo, Sep 1 2022
DOI: 10.5281/zenodo.7041654, https://zenodo.org/records/7041654
Dataset
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FofanovLab/mtsv_tools: v2.0.1
Furstenau, T. N. (Contributor), Schneider, T. (Contributor) & Fofanov, V. (Contributor), Zenodo, Mar 18 2022
DOI: 10.5281/zenodo.6369369, https://zenodo.org/record/6369369
Dataset
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Dietary metabarcoding datasets for the southern meadow jumping mouse (Zapus luteus luteus)
Sanchez, D. (Contributor), Fofanov, V. (Contributor), Lyman, J. (Contributor), Zahratka, J. (Contributor), Walker, F. (Contributor) & Chambers, C. (Contributor), Zenodo, Jun 9 2022
DOI: 10.5281/zenodo.6506730, https://zenodo.org/records/6506730
Dataset
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Dietary metabarcoding datasets for the southern meadow jumping mouse (Zapus luteus luteus)
Sanchez, D. (Contributor), Fofanov, V. (Contributor), Lyman, J. (Contributor), Zahratka, J. (Contributor), Walker, F. (Contributor) & Chambers, C. (Contributor), Zenodo, Jun 9 2022
DOI: 10.5061/dryad.j0zpc86h8, https://zenodo.org/records/6628397
Dataset
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Data from: Megafauna decline have reduced pathogen dispersal which may have increased emergent infectious diseases
Doughty, C. (Contributor), Prys-Jones, T. (Contributor), Faurby, S. (Contributor), Hepp, C. (Contributor), Fofanov, V. (Contributor), Abraham, A. (Contributor), Leshyk, V. (Contributor), Nieto, N. (Contributor) & Galetti, M. (Contributor), Zenodo, Apr 17 2020
DOI: 10.5061/dryad.dfn2z34xk, https://zenodo.org/records/4997771
Dataset