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Collaborations and top research areas from the last five years
Grants
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Computational Tools for Predicting and Understanding Knee Pain Spatial Patterns
Sun, X. (PI)
Project: Research project
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A reference-guided iterative approach to polish the nanopore sequencing basecalling for therapeutic RNA quality control
Wang, Z., Tu, M. J., Liu, Z., Wang, K. K., Fang, Y., Hao, N., Zhang, H. H., Que, J., Sun, X., Yu, A. M. & Ding, H., Dec 2025, In: Communications biology. 8, 1, 1406.Research output: Contribution to journal › Article › peer-review
Open Access -
Determining the incidence, risk factors and biological drivers of irritable bowel syndrome (IBS) as part of the constellation of postacute sequelae of SARS-CoV-2 infection (PASC) outcomes in the Arizona CoVHORT-GI: a longitudinal cohort study
Brown, K. P., Austhof, E., McFadden, C. M., Scranton, C., Sun, X., Vujkovic-Cviji, I., Rodriguez, D., Falk, L., Heslin, K. M., Arani, G., Obergh, V., Bessey, K. & Cooper, K., Jan 30 2025, In: BMJ open. 15, 1, e095093.Research output: Contribution to journal › Article › peer-review
Open Access -
Flexible analysis of spatial transcriptomics data (FAST): a deconvolution approach
Zhang, M., Parker, J., An, L., Liu, Y. & Sun, X., Dec 2025, In: BMC bioinformatics. 26, 1, 35.Research output: Contribution to journal › Article › peer-review
Open Access3 Link opens in a new tab Scopus citations -
Morphological characterization of median nerve and transverse carpal ligament from ultrasound images using convolutional neural networks
Hawk, J. L., Walter, S., Sun, X. & Li, Z. M., Sep 2025, In: Medical Engineering and Physics. 143, 104383.Research output: Contribution to journal › Article › peer-review
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Training data diversity enhances the basecalling of novel RNA modification-induced nanopore sequencing readouts
Wang, Z., Liu, Z., Fang, Y., Zhang, H. H., Sun, X., Hao, N., Que, J. & Ding, H., Dec 2025, In: Nature communications. 16, 1, 679.Research output: Contribution to journal › Article › peer-review
Open Access12 Link opens in a new tab Scopus citations
Datasets
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Raw data for Training Data Diversity Enhances the Basecalling of Novel RNA Modification-Induced Nanopore Sequencing Readouts
Wang, Z. (Creator), Fang, Y. (Contributor), Zhang, H. H. (Contributor), Sun, X. (Contributor), Hao, N. (Contributor), Que, J. (Contributor) & Ding, H. (Creator), University of Arizona Research Data Repository, 2024
DOI: 10.25422/azu.data.27976647.v2, https://arizona.figshare.com/articles/dataset/Raw_data_for_i_Training_Data_Diversity_Enhances_the_Basecalling_of_Novel_RNA_Modification-Induced_Nanopore_Sequencing_Readouts_i_/27976647/2
Dataset
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Differences in Metabolomic Profiles by Birthplace in Mexican-Origin Hispanic Men Who Participated in a Weight Loss Lifestyle Intervention
Lopez-Pentecost, M. (Creator), Garcia, D. O. (Creator), Sun, X. (Creator), Thomson, C. A. (Creator), Chow, H.-H. S. (Creator) & Martinez, J. A. (Creator), SAGE Journals, 2023
DOI: 10.25384/sage.c.6447091.v1, https://sage.figshare.com/collections/Differences_in_Metabolomic_Profiles_by_Birthplace_in_Mexican-Origin_Hispanic_Men_Who_Participated_in_a_Weight_Loss_Lifestyle_Intervention/6447091/1
Dataset
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Raw data for Training Data Diversity Enhances the Basecalling of Novel RNA Modification-Induced Nanopore Sequencing Readouts
Wang, Z. (Creator), Fang, Y. (Contributor), Zhang, H. H. (Contributor), Sun, X. (Contributor), Hao, N. (Contributor), Que, J. (Contributor) & Ding, H. (Creator), University of Arizona Research Data Repository, 2024
DOI: 10.25422/azu.data.27976647, https://arizona.figshare.com/articles/dataset/Raw_data_for_i_Training_Data_Diversity_Enhances_the_Basecalling_of_Novel_RNA_Modification-Induced_Nanopore_Sequencing_Readouts_i_/27976647
Dataset
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Differences in Metabolomic Profiles by Birthplace in Mexican-Origin Hispanic Men Who Participated in a Weight Loss Lifestyle Intervention
Lopez-Pentecost, M. (Creator), Garcia, D. O. (Creator), Sun, X. (Creator), Thomson, C. A. (Creator), Chow, H.-H. S. (Creator) & Martinez, J. A. (Creator), SAGE Journals, 2023
DOI: 10.25384/sage.c.6447091, https://sage.figshare.com/collections/Differences_in_Metabolomic_Profiles_by_Birthplace_in_Mexican-Origin_Hispanic_Men_Who_Participated_in_a_Weight_Loss_Lifestyle_Intervention/6447091
Dataset
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Differences in Metabolomic Profiles by Birthplace in Mexican-Origin Hispanic Men Who Participated in a Weight Loss Lifestyle Intervention
Lopez-Pentecost, M. (Creator), Garcia, D. O. (Creator), Sun, X. (Creator), Thomson, C. A. (Creator), Chow, H.-H. S. (Creator) & Martinez, J. A. (Creator), SAGE Journals, 2023
DOI: 10.25384/sage.c.6447091, https://sage.figshare.com/collections/Differences_in_Metabolomic_Profiles_by_Birthplace_in_Mexican-Origin_Hispanic_Men_Who_Participated_in_a_Weight_Loss_Lifestyle_Intervention/6447091
Dataset