Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation

Robin Paul; Robert E. Jinkerson; Kristina Buss; Jason Steel; Remus Mohr; Wolfgang R. Hess; Min Chen; Petra Fromme

doi:10.1128/genomeA.e01166-13

Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation

Robin Paul
, Robert E. Jinkerson
, Kristina Buss
, Jason Steel
, Remus Mohr
, Wolfgang R. Hess
, Min Chen
, Petra Fromme

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Abstract

Leptolyngbya sp. strain Heron Island is a cyanobacterium exhibiting chromatic acclimation. However, this strain has strong interactions with other bacteria, making it impossible to obtain axenic cultures for sequencing. A protocol involving an analysis of tetranucleotide frequencies, G+C content, and BLAST searches has been described for separating the cyanobacterial scaffolds from those of its cooccurring bacteria.

Original language	English (US)
Article number	e01166-13
Journal	Genome Announcements
Volume	2
Issue number	1
DOIs	https://doi.org/10.1128/genomeA.e01166-13
State	Published - 2014

ASJC Scopus subject areas

Genetics
Molecular Biology

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abstract = "Leptolyngbya sp. strain Heron Island is a cyanobacterium exhibiting chromatic acclimation. However, this strain has strong interactions with other bacteria, making it impossible to obtain axenic cultures for sequencing. A protocol involving an analysis of tetranucleotide frequencies, G+C content, and BLAST searches has been described for separating the cyanobacterial scaffolds from those of its cooccurring bacteria.",

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T1 - Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation

AU - Paul, Robin

AU - Jinkerson, Robert E.

AU - Buss, Kristina

AU - Steel, Jason

AU - Mohr, Remus

AU - Hess, Wolfgang R.

AU - Chen, Min

AU - Fromme, Petra

PY - 2014

Y1 - 2014

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AB - Leptolyngbya sp. strain Heron Island is a cyanobacterium exhibiting chromatic acclimation. However, this strain has strong interactions with other bacteria, making it impossible to obtain axenic cultures for sequencing. A protocol involving an analysis of tetranucleotide frequencies, G+C content, and BLAST searches has been described for separating the cyanobacterial scaffolds from those of its cooccurring bacteria.

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UR - https://www.scopus.com/pages/publications/84999027855#tab=citedBy

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DO - 10.1128/genomeA.e01166-13

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JO - Genome Announcements

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IS - 1

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ER -

Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation

Abstract

ASJC Scopus subject areas

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