TY - JOUR
T1 - Morphological plant modeling
T2 - Unleashing geometric and topological potential within the plant sciences
AU - Bucksch, Alexander
AU - Atta-Boateng, Acheampong
AU - Azihou, Akomian F.
AU - Battogtokh, Dorjsuren
AU - Baumgartner, Aly
AU - Binder, Brad M.
AU - Braybrook, Siobhan A.
AU - Chang, Cynthia
AU - Coneva, Viktoirya
AU - DeWitt, Thomas J.
AU - Fletcher, Alexander G.
AU - Gehan, Malia A.
AU - Diaz-Martinez, Diego Hernan
AU - Hong, Lilan
AU - Iyer-Pascuzzi, Anjali S.
AU - Klein, Laura L.
AU - Leiboff, Samuel
AU - Li, Mao
AU - Lynch, Jonathan P.
AU - Maizel, Alexis
AU - Maloof, Julin N.
AU - Cody Markelz, R. J.
AU - Martinez, Ciera C.
AU - Miller, Laura A.
AU - Mio, Washington
AU - Palubicki, Wojtek
AU - Poorter, Hendrik
AU - Pradal, Christophe
AU - Price, Charles A.
AU - Puttonen, Eetu
AU - Reese, John B.
AU - Rellán-Álvarez, Rubén
AU - Spalding, Edgar P.
AU - Sparks, Erin E.
AU - Topp, Christopher N.
AU - Williams, Joseph H.
AU - Chitwood, Daniel H.
N1 - Publisher Copyright: © 2017 Bucksch, Atta-Boateng, Azihou, Battogtokh, Baumgartner, Binder, Braybrook, Chang, Coneva, DeWitt, Fletcher, Gehan, Diaz-Martinez, Hong, Iyer-Pascuzzi, Klein, Leiboff, Li, Lynch, Maizel, Maloof, Markelz, Martinez, Miller, Mio, Palubicki, Poorter, Pradal, Price, Puttonen, Reese, Rellán-Álvarez, Spalding, Sparks, Topp, Williams and Chitwood.
PY - 2017/6/9
Y1 - 2017/6/9
N2 - The geometries and topologies of leaves, flowers, roots, shoots, and their arrangements have fascinated plant biologists and mathematicians alike. As such, plant morphology is inherently mathematical in that it describes plant form and architecture with geometrical and topological techniques. Gaining an understanding of how to modify plant morphology, through molecular biology and breeding, aided by a mathematical perspective, is critical to improving agriculture, and the monitoring of ecosystems is vital to modeling a future with fewer natural resources. In this white paper, we begin with an overview in quantifying the form of plants and mathematical models of patterning in plants. We then explore the fundamental challenges that remain unanswered concerning plant morphology, from the barriers preventing the prediction of phenotype from genotype to modeling the movement of leaves in air streams. We end with a discussion concerning the education of plant morphology synthesizing biological and mathematical approaches and ways to facilitate research advances through outreach, cross-disciplinary training, and open science. Unleashing the potential of geometric and topological approaches in the plant sciences promises to transform our understanding of both plants and mathematics.
AB - The geometries and topologies of leaves, flowers, roots, shoots, and their arrangements have fascinated plant biologists and mathematicians alike. As such, plant morphology is inherently mathematical in that it describes plant form and architecture with geometrical and topological techniques. Gaining an understanding of how to modify plant morphology, through molecular biology and breeding, aided by a mathematical perspective, is critical to improving agriculture, and the monitoring of ecosystems is vital to modeling a future with fewer natural resources. In this white paper, we begin with an overview in quantifying the form of plants and mathematical models of patterning in plants. We then explore the fundamental challenges that remain unanswered concerning plant morphology, from the barriers preventing the prediction of phenotype from genotype to modeling the movement of leaves in air streams. We end with a discussion concerning the education of plant morphology synthesizing biological and mathematical approaches and ways to facilitate research advances through outreach, cross-disciplinary training, and open science. Unleashing the potential of geometric and topological approaches in the plant sciences promises to transform our understanding of both plants and mathematics.
KW - Mathematics
KW - Modeling
KW - Morphology
KW - Plant biology
KW - Plant science
KW - Topology
UR - http://www.scopus.com/inward/record.url?scp=85021121748&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85021121748&partnerID=8YFLogxK
U2 - 10.3389/fpls.2017.00900
DO - 10.3389/fpls.2017.00900
M3 - Review article
SN - 1664-462X
VL - 8
JO - Frontiers in Plant Science
JF - Frontiers in Plant Science
M1 - 900
ER -